Center for Molecular Modeling - L. Hermosilla https://molmod.ugent.be/publication-authors/l-hermosilla en On the Possibility of [1,5] Sigmatropic Shifts in Bicyclo[4.2.0]octa-2,4-dienes https://molmod.ugent.be/publications/possibility-15-sigmatropic-shifts-bicyclo420octa-24-dienes <div class="field field-name-field-a1-authors field-type-taxonomy-term-reference field-label-hidden"> <span class="field-items"> H. Goossens, J.M. Winne, S. Wouters, L. Hermosilla, P. J. De Clercq, M. Waroquier, V. Van Speybroeck, S. Catak </span> </div> <div class="field field-name-field-journal-title field-type-taxonomy-term-reference field-label-hidden"> <span class="field-items"> Journal of Organic Chemistry </span> </div> <div class="field field-name-field-vol-iss field-type-text field-label-hidden"> <div class="field-items"> <div class="field-item even">80 (5) 2609-2620</div> </div> </div> <div class="field field-name-field-a1year field-type-datestamp field-label-hidden"> <div class="field-items"> <div class="field-item even"><span class="date-display-single" property="dc:date" datatype="xsd:dateTime" content="2015-01-01T00:00:00+01:00">2015</span></div> </div> </div> <div class="field field-name-field-a1-type field-type-list-text field-label-hidden"> <div class="field-items"> <div class="field-item even">A1</div> </div> </div> <div class="field field-name-field-not-a-cmm-publication field-type-list-boolean field-label-hidden"> <div class="field-items"> <div class="field-item even"></div> </div> </div> <div class="field field-name-body field-type-text-with-summary field-label-above"> <h3><div class="field-label">Abstract&nbsp;</div></h3> <div class="field-items"> <div class="field-item even" property="content:encoded"><div class="tex2jax"><p>The thermal equilibration of the methyl esters of endiandric acids D and E was subject to a computational study. An electrocyclic pathway via an electrocyclic ring opening followed by a ring flip and a subsequent electrocyclization proposed by Nicolaou [Chem. Soc. Rev. 2009], was computationally explored. The free energy barrier for this electrocyclic route was shown to be very close to the bicyclo[4.2.0]octa-2,4-diene reported by Huisgen [Tet. Lett. 1968]. Furthermore, the possibility of a [1,5] sigmatropic alkyl group shift of bicyclo[4.2.0]octa-2,4-diene systems at high temperatures was explored in a combined computational and experimental study. Calculated reaction barriers for a biradical-mediated stepwise [1,5] sigmatropic alkyl group shift were shown to be comparable with the reaction barriers for the bicyclo[4.1.0]hepta-2,4-diene (norcaradiene) walk rearrangement, whereas calculated reaction barriers for a concerted [1,5] sigmatropic alkyl group shift were found to be higher in energy. However, the stepwise pathway is suggested to only be feasible for appropriately substituted compounds. Experiments conducted on a deuterated analogous diol derivative confirmed the calculated (large) differences in barriers between electrocyclic and sigmatropic pathways.</p> </div></div> </div> </div> <div class="field field-name-field-open-access field-type-list-boolean field-label-hidden"> <div class="field-items"> <div class="field-item even"></div> </div> </div> <div class="field field-name-field-doi field-type-text field-label-above"> <h3><div class="field-label">DOI&nbsp;</div></h3> <div class="field-items"> <div class="field-item even"><div class="tex2jax"><p><a href="http://dx.doi.org/10.1021/jo5027639">http://dx.doi.org/10.1021/jo5027639</a></p> </div></div> </div> </div> <div class="field field-name-field-a1-file field-type-file field-label-above"> <h3><div class="field-label">Private attachment&nbsp;</div></h3> <div class="field-items"> <div class="field-item even"><span class="file"><img class="file-icon" alt="PDF icon" title="application/pdf" src="/modules/file/icons/application-pdf.png" /> <a href="https://molmod.ugent.be/system/files/15_JOC_xxxx_HGoossens.pdf" type="application/pdf; length=922620">15_JOC_xxxx_HGoossens.pdf</a></span></div> </div> </div> Sun, 30 Nov 2014 13:27:40 +0000 michel 3415 at https://molmod.ugent.be https://molmod.ugent.be/publications/possibility-15-sigmatropic-shifts-bicyclo420octa-24-dienes#comments Competitive Reactions of Organophosphorus Radicals on Coke Surfaces https://molmod.ugent.be/publications/competitive-reactions-organophosphorus-radicals-coke-surfaces <div class="field field-name-field-a1-image field-type-image field-label-hidden"> <div class="field-items"> <div class="field-item even"><img typeof="foaf:Image" src="//molmod.ugent.be/sites/default/files/styles/large/public/cheuerj_catak.jpg?itok=o4Gx_xNR" width="620" height="232" alt="" title="Competitive reactions of organophosphorous radicals on coke surfaces" /></div> </div> </div> <div class="field field-name-field-a1-authors field-type-taxonomy-term-reference field-label-hidden"> <span class="field-items"> S. Catak, K. Hemelsoet, L. Hermosilla, M. Waroquier, V. Van Speybroeck </span> </div> <div class="field field-name-field-journal-title field-type-taxonomy-term-reference field-label-hidden"> <span class="field-items"> Chemistry - A European Journal </span> </div> <div class="field field-name-field-vol-iss field-type-text field-label-hidden"> <div class="field-items"> <div class="field-item even">17 (43), 12027–12036</div> </div> </div> <div class="field field-name-field-a1year field-type-datestamp field-label-hidden"> <div class="field-items"> <div class="field-item even"><span class="date-display-single" property="dc:date" datatype="xsd:dateTime" content="2011-01-01T00:00:00+01:00">2011</span></div> </div> </div> <div class="field field-name-field-a1-type field-type-list-text field-label-hidden"> <div class="field-items"> <div class="field-item even">A1</div> </div> </div> <div class="field field-name-field-not-a-cmm-publication field-type-list-boolean field-label-hidden"> <div class="field-items"> <div class="field-item even"></div> </div> </div> <div class="field field-name-field-cover field-type-image field-label-hidden"> <div class="field-items"> <div class="field-item even"><img typeof="foaf:Image" src="//molmod.ugent.be/sites/default/files/styles/cover/public/cover chem eur j 17.43.jpg?itok=WB4I63K9" width="270" height="358" alt="" /></div> </div> </div> <div class="field field-name-body field-type-text-with-summary field-label-above"> <h3><div class="field-label">Abstract&nbsp;</div></h3> <div class="field-items"> <div class="field-item even" property="content:encoded"><div class="tex2jax"><p>The efficacy of organophosphorus radicals as anticoking agents was subjected to a computational study in which a representative set of radicals derived from industrially relevant organophosphorus additives was used to explore competitive reaction pathways on the graphene-like coke surface formed during thermal cracking. The aim was to investigate the nature of the competing reactions of different organophosphorus radicals on coke surfaces, and elucidate their mode of attack and inhibiting effect on the forming coke layer by use of contemporary computational methods. Density functional calculations on benzene and a larger polyaromatic hydrocarbon, namely, ovalene, showed that organophosphorus radicals have a high propensity to add to the periphery of the coke surface, inhibiting methyl radical induced hydrogen abstraction, which is known to be a key step in coke growth. Low addition barriers reported for a phosphatidyl radical suggest competitive aptitude against coke formation. Moreover, organophosphorus additives bearing aromatic substituents, which were shown to interact with the coke surface through dispersive π–π stacking interactions, are suggested to play a nontrivial role in hindering further stacking among coke surfaces. This may be the underlying rationale behind experimental observation of softer coke in the presence of organophosphorus radicals. The ultimate goal is to provide information that will be useful in building single-event microkinetic models. This study presents pertinent information on potential reactions that could be taken up in these models.</p> </div></div> </div> </div> <div class="field field-name-field-open-access field-type-list-boolean field-label-hidden"> <div class="field-items"> <div class="field-item even"></div> </div> </div> <div class="field field-name-field-doi field-type-text field-label-above"> <h3><div class="field-label">DOI&nbsp;</div></h3> <div class="field-items"> <div class="field-item even"><div class="tex2jax"><p><a href="http://dx.doi.org/10.1002/chem.201100712">http://dx.doi.org/10.1002/chem.201100712</a></p> </div></div> </div> </div> <div class="field field-name-field-a1-file field-type-file field-label-above"> <h3><div class="field-label">Private attachment&nbsp;</div></h3> <div class="field-items"> <div class="field-item even"><span class="file"><img class="file-icon" alt="PDF icon" title="application/pdf" src="/modules/file/icons/application-pdf.png" /> <a href="https://molmod.ugent.be/system/files/cover%20chem%20eur%20j.17.43.pdf" type="application/pdf; length=1738548">cover chem eur j.17.43.pdf</a></span></div> <div class="field-item odd"><span class="file"><img class="file-icon" alt="PDF icon" title="application/pdf" src="/modules/file/icons/application-pdf.png" /> <a href="https://molmod.ugent.be/system/files/11%20chem%20eur%20j%2017%2843%2912027%20catak.pdf" type="application/pdf; length=985557">11 chem eur j 17(43)12027 catak.pdf</a></span></div> </div> </div> Wed, 12 Oct 2011 13:56:17 +0000 wim 71 at https://molmod.ugent.be https://molmod.ugent.be/publications/competitive-reactions-organophosphorus-radicals-coke-surfaces#comments Kinetic and Mechanistic Study on p-Quinodimethane Formation in the Sulfinyl Precursor Route for the Polymerization of Poly(p-phenylenevinylene) (PPV) https://molmod.ugent.be/publications/kinetic-and-mechanistic-study-p-quinodimethane-formation-sulfinyl-precursor-route <div class="field field-name-field-a1-image field-type-image field-label-hidden"> <div class="field-items"> <div class="field-item even"><img typeof="foaf:Image" src="//molmod.ugent.be/sites/default/files/styles/large/public/ma-2010-013012_0013.gif?itok=fzpI7Ezo" width="620" height="202" alt="" /></div> </div> </div> <div class="field field-name-field-a1-authors field-type-taxonomy-term-reference field-label-hidden"> <span class="field-items"> L. Hermosilla, S. Catak, V. Van Speybroeck, M. Waroquier, J. Vandenbergh, F. Motmans, P. Adriaensens, L. Lutsen, T. Cleij, D. Vanderzande </span> </div> <div class="field field-name-field-journal-title field-type-taxonomy-term-reference field-label-hidden"> <span class="field-items"> Macromolecules </span> </div> <div class="field field-name-field-vol-iss field-type-text field-label-hidden"> <div class="field-items"> <div class="field-item even">43 (18), 7424–7433</div> </div> </div> <div class="field field-name-field-a1year field-type-datestamp field-label-hidden"> <div class="field-items"> <div class="field-item even"><span class="date-display-single" property="dc:date" datatype="xsd:dateTime" content="2010-01-01T00:00:00+01:00">2010</span></div> </div> </div> <div class="field field-name-field-a1-type field-type-list-text field-label-hidden"> <div class="field-items"> <div class="field-item even">A1</div> </div> </div> <div class="field field-name-body field-type-text-with-summary field-label-above"> <h3><div class="field-label">Abstract&nbsp;</div></h3> <div class="field-items"> <div class="field-item even" property="content:encoded"><div class="tex2jax"><p>The kinetics of p-quinodimethane formation in the sulfinyl precursor route for the poly(p-phenylenevinylene) (PPV) polymerization was studied using stop-flow UV−vis spectroscopy and theoretical first principle calculations. Different sulfinyl monomers were studied by means of quantitative kinetic experiments regarding the p-quinodimethane formation in 2-butanol. The influence of the solvent, the nature of the aromatic moiety, and the substituents on the phenyl core was analyzed by means of qualitative experiments. Quantitative measurements, using pseudo-first-order reaction conditions, were performed in order to assess the effect of the polarizer and the leaving group on the reaction rates. To obtain additional fundamental insight into the pathway leading to p-quinodimethane formation, density functional theory calculations were performed and subsequent reaction rate coefficients were determined from a theoretical point of view, enabling a profound comparison with experiment. From all these data, an E2 mechanism is proposed for the p-quinodimethane formation in the sulfinyl precursor route.</p> </div></div> </div> </div> <div class="field field-name-field-open-access field-type-list-boolean field-label-hidden"> <div class="field-items"> <div class="field-item even"></div> </div> </div> <div class="field field-name-field-doi field-type-text field-label-above"> <h3><div class="field-label">DOI&nbsp;</div></h3> <div class="field-items"> <div class="field-item even"><div class="tex2jax"><p><a href="http://dx.doi.org/10.1021/ma1013012">http://dx.doi.org/10.1021/ma1013012</a></p> </div></div> </div> </div> <div class="field field-name-field-a1-file field-type-file field-label-above"> <h3><div class="field-label">Private attachment&nbsp;</div></h3> <div class="field-items"> <div class="field-item even"><span class="file"><img class="file-icon" alt="PDF icon" title="application/pdf" src="/modules/file/icons/application-pdf.png" /> <a href="https://molmod.ugent.be/system/files/10%20macromolecules%2043%2C%207424%20hermosilla.pdf" type="application/pdf; length=2471132">10 macromolecules 43, 7424 hermosilla.pdf</a></span></div> </div> </div> Tue, 13 Sep 2011 12:01:44 +0000 wim 382 at https://molmod.ugent.be https://molmod.ugent.be/publications/kinetic-and-mechanistic-study-p-quinodimethane-formation-sulfinyl-precursor-route#comments DFT insight into the polymerization mechanism of conjugated electroluminescent polymer PPV https://molmod.ugent.be/c1_c3_publications/dft-insight-polymerization-mechanism-conjugated-electroluminescent-polymer-ppv <div class="field field-name-field-a1-authors field-type-taxonomy-term-reference field-label-hidden"> <span class="field-items"> <a href="/publication-authors/s-catak" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">S. Catak</a>, <a href="/publication-authors/l-hermosilla" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">L. Hermosilla</a>, <a href="/publication-authors/b-champagne" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">B. Champagne</a>, <a href="/publication-authors/d-vanderzande" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">D. Vanderzande</a>, <a href="/publication-authors/m-waroquier" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">M. Waroquier</a>, <a href="/publication-authors/v-van-speybroeck" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">V. Van Speybroeck</a> </span> </div> <div class="field field-name-field-abstract-page field-type-text field-label-hidden"> <div class="field-items"> <div class="field-item even">WP2/5</div> </div> </div> <div class="field field-name-field-poster-or-talk field-type-list-text field-label-hidden"> <div class="field-items"> <div class="field-item even">Poster</div> </div> </div> <div class="field field-name-field-conference-name field-type-text field-label-above"> <h3><div class="field-label">Conference / event / venue&nbsp;</div></h3> <div class="field-items"> <div class="field-item even">Belgium Science Policy (Belspo)–Annual Meeting for Interuniversity Attraction Poles (IUAP)</div> </div> </div> <div class="field field-name-field-conference-location field-type-text field-label-hidden"> <div class="field-items"> <div class="field-item even">Leuven, Belgium</div> </div> </div> <div class="field field-name-field-conference-dates field-type-date field-label-hidden"> <div class="field-items"> <div class="field-item even"><span class="date-display-range"><span class="date-display-start" property="dc:date" datatype="xsd:dateTime" content="2011-11-21T00:00:00+01:00">Monday, 21 November, 2011</span> to <span class="date-display-end" property="dc:date" datatype="xsd:dateTime" content="2011-11-22T00:00:00+01:00">Tuesday, 22 November, 2011</span></span></div> </div> </div> <div class="field field-name-field-abstract-private field-type-file field-label-above"> <h3><div class="field-label">Abstract (private)&nbsp;</div></h3> <div class="field-items"> <div class="field-item even"><span class="file"><img class="file-icon" alt="PDF icon" title="application/pdf" src="/modules/file/icons/application-pdf.png" /> <a href="https://molmod.ugent.be/system/files/2011%20IAP%20WP2_5.pdf" type="application/pdf; length=46729">2011 IAP WP2_5.pdf</a></span></div> </div> </div> <div class="field field-name-field-conference-reference field-type-taxonomy-term-reference field-label-above"> <h3 class="field-label">Conference reference</h3> <span class="field-items"> <a href="/conferences/annual-meeting-interuniversity-attraction-poles-iuap-2011" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">Annual Meeting for Interuniversity Attraction Poles (IUAP) 2011</a> </span> </div> Wed, 18 Jan 2012 17:05:17 +0000 catak 996 at https://molmod.ugent.be https://molmod.ugent.be/c1_c3_publications/dft-insight-polymerization-mechanism-conjugated-electroluminescent-polymer-ppv#comments DFT insight into the mechanism towards the synthesis of the conjugated electroluminescent polymer PPV https://molmod.ugent.be/c1_c3_publications/dft-insight-mechanism-towards-synthesis-conjugated-electroluminescent-polymer-ppv <div class="field field-name-field-a1-authors field-type-taxonomy-term-reference field-label-hidden"> <span class="field-items"> <a href="/publication-authors/l-hermosilla" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">L. Hermosilla</a>, <a href="/publication-authors/v-van-speybroeck" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">V. Van Speybroeck</a>, <a href="/publication-authors/m-waroquier" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">M. Waroquier</a>, <a href="/publication-authors/d-vanderzande" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">D. Vanderzande</a> </span> </div> <div class="field field-name-field-poster-or-talk field-type-list-text field-label-hidden"> <div class="field-items"> <div class="field-item even">Poster</div> </div> </div> <div class="field field-name-field-conference-name field-type-text field-label-above"> <h3><div class="field-label">Conference / event / venue&nbsp;</div></h3> <div class="field-items"> <div class="field-item even">IAP-PAI P6/27 Annual Meeting</div> </div> </div> <div class="field field-name-field-conference-location field-type-text field-label-hidden"> <div class="field-items"> <div class="field-item even">Leuven, Belgium</div> </div> </div> <div class="field field-name-field-conference-dates field-type-date field-label-hidden"> <div class="field-items"> <div class="field-item even"><span class="date-display-range"><span class="date-display-start" property="dc:date" datatype="xsd:dateTime" content="2009-12-14T00:00:00+01:00">Monday, 14 December, 2009</span> to <span class="date-display-end" property="dc:date" datatype="xsd:dateTime" content="2009-12-15T00:00:00+01:00">Tuesday, 15 December, 2009</span></span></div> </div> </div> Mon, 17 Oct 2011 14:25:00 +0000 wim 775 at https://molmod.ugent.be https://molmod.ugent.be/c1_c3_publications/dft-insight-mechanism-towards-synthesis-conjugated-electroluminescent-polymer-ppv#comments