Center for Molecular Modeling - P. Dobbelaere https://molmod.ugent.be/publication-authors/p-dobbelaere en Cluster-Based Machine Learning Potentials to Describe Disordered MetalOrganic Frameworks up to the Mesoscale https://molmod.ugent.be/publications/cluster-based-machine-learning-potentials-describe-disordered-metalorganic-frameworks <div class="field field-name-field-a1-authors field-type-taxonomy-term-reference field-label-hidden"> <span class="field-items"> P. Dobbelaere, S. Vandenhaute, V. Van Speybroeck </span> </div> <div class="field field-name-field-journal-title field-type-taxonomy-term-reference field-label-hidden"> <span class="field-items"> Chemistry of Materials </span> </div> <div class="field field-name-field-vol-iss field-type-text field-label-hidden"> <div class="field-items"> <div class="field-item even">37, 15, 5696-5709</div> </div> </div> <div class="field field-name-field-a1year field-type-datestamp field-label-hidden"> <div class="field-items"> <div class="field-item even"><span class="date-display-single" property="dc:date" datatype="xsd:dateTime" content="2025-01-01T00:00:00+01:00">2025</span></div> </div> </div> <div class="field field-name-field-a1-type field-type-list-text field-label-hidden"> <div class="field-items"> <div class="field-item even">A1</div> </div> </div> <div class="field field-name-field-not-a-cmm-publication field-type-list-boolean field-label-hidden"> <div class="field-items"> <div class="field-item even"></div> </div> </div> <div class="field field-name-body field-type-text-with-summary field-label-above"> <h3><div class="field-label">Abstract&nbsp;</div></h3> <div class="field-items"> <div class="field-item even" property="content:encoded"><div class="tex2jax"><p>Metal-organic frameworks (MOFs) are highly interesting and tunable materials. By incorporating spatial defects into their atomic structure, MOFs can be finetuned to exhibit precise chemical functionalities, extending their applicability in various technological fields. Defect engineering requires a fundamental understanding of the nature of spatial disorder and consequent changes in material properties, which is currently lacking. We introduce the cluster-based learning methodology, enabling the development of state-of-the-art machine learning potentials (MLPs) from defective systems at any length scale. Our method identifies atomic interactions in bulk structures and extracts local environments as finite molecular fragments to augment the model's training data where needed. We show that cluster-based learning delivers MLPs capable of accurately describing spatial defects in mesoscopic systems with over 20 thousand atoms. Afterward, we select our best model to investigate some major mechanical properties of spatially disordered UiO-66-derived structures, elucidating the influence of defect concentration and composition on material behavior. Our analysis includes large supercell structures, demonstrating that (near-) ab initio accuracy is within reach at the mesoscale.</p> </div></div> </div> </div> <div class="field field-name-field-open-access field-type-list-boolean field-label-hidden"> <div class="field-items"> <div class="field-item even"></div> </div> </div> <div class="field field-name-field-open-access-type field-type-list-text field-label-hidden"> <div class="field-items"> <div class="field-item even">Gold Open Access</div> </div> </div> <div class="field field-name-field-doi field-type-text field-label-above"> <h3><div class="field-label">DOI&nbsp;</div></h3> <div class="field-items"> <div class="field-item even"><div class="tex2jax"><p><a href="http://dx.doi.org/10.1021/acs.chemmater.5c00821">http://dx.doi.org/10.1021/acs.chemmater.5c00821</a></p> </div></div> </div> </div> <div class="field field-name-field-a1-file field-type-file field-label-above"> <h3><div class="field-label">Private attachment&nbsp;</div></h3> <div class="field-items"> <div class="field-item even"><span class="file"><img class="file-icon" alt="PDF icon" title="application/pdf" src="/modules/file/icons/application-pdf.png" /> <a href="https://molmod.ugent.be/system/files/dobbelaere-et-al-2025-cluster-based-machine-learning-potentials-to-describe-disordered-metal-organic-frameworks-up-to.pdf" type="application/pdf; length=8035060">dobbelaere-et-al-2025-cluster-based-machine-learning-potentials-to-describe-disordered-metal-organic-frameworks-up-to.pdf</a></span></div> </div> </div> Tue, 05 Aug 2025 11:00:10 +0000 leen 6450 at https://molmod.ugent.be https://molmod.ugent.be/publications/cluster-based-machine-learning-potentials-describe-disordered-metalorganic-frameworks#comments MIL-91(Al) to Boost Solid–Solid Conversion Reactions in Li-Se Batteries https://molmod.ugent.be/publications/mil-91al-boost-solid%E2%80%93solid-conversion-reactions-li-se-batteries <div class="field field-name-field-a1-authors field-type-taxonomy-term-reference field-label-hidden"> <span class="field-items"> T. Mutlu-Cetinkaya, P. Dobbelaere, W. Temmerman, W. Lu, V. Pimenta, V. Van Speybroeck, R. Demir-Cakan </span> </div> <div class="field field-name-field-journal-title field-type-taxonomy-term-reference field-label-hidden"> <span class="field-items"> Energy &amp; Environmental Materials </span> </div> <div class="field field-name-field-vol-iss field-type-text field-label-hidden"> <div class="field-items"> <div class="field-item even">8, 5</div> </div> </div> <div class="field field-name-field-a1year field-type-datestamp field-label-hidden"> <div class="field-items"> <div class="field-item even"><span class="date-display-single" property="dc:date" datatype="xsd:dateTime" content="2025-01-01T00:00:00+01:00">2025</span></div> </div> </div> <div class="field field-name-field-a1-type field-type-list-text field-label-hidden"> <div class="field-items"> <div class="field-item even">A1</div> </div> </div> <div class="field field-name-field-not-a-cmm-publication field-type-list-boolean field-label-hidden"> <div class="field-items"> <div class="field-item even"></div> </div> </div> <div class="field field-name-body field-type-text-with-summary field-label-above"> <h3><div class="field-label">Abstract&nbsp;</div></h3> <div class="field-items"> <div class="field-item even" property="content:encoded"><div class="tex2jax"><p>Lithium-Selenium (Li-Se) batteries have emerged as one of the most promising candidates for next-generation energy storage systems owing to superior electronic conductivity, impressive volumetric capacity, and enhanced compatibility with carbonate electrolyte of selenium, comparable to sulfur. Despite these advantages, the development of Li-Se batteries is impeded by several intrinsic challenges, including volume expansion during the discharge process and the consequent sluggish reaction kinetics that undermine their electrochemical performance. In this study, MIL-91(Al) is used as an electrode additive to accelerate the one-step mutual solid–solid conversion reaction between Se and Li<sub>2</sub>Se in the carbonate-based electrolyte. By doing so, uncontrollable deposition of Li<sub>2</sub>Se is effectively mitigated, enhancing the electrochemical performance of the system. Thus, the use of MIL-91(Al) results in reduced internal resistance and faster Li-ion transfer rate, as analyzed by SPEIS and GITT. Ab initio calculations and molecular dynamics simulations further reveal that Li<sub>2</sub>Se anchors to closely situated dangling oxygens of the phosphonate group of the organic linker of MIL-91(Al), inducing relaxation of the Li-Se-Li angle and stabilizing the overall structure. Accordingly, the MIL-91(Al)-containing Li-Se cells demonstrate a high specific capacity of approximately 530 mAh g<sup>−1</sup> at 1C (675 mA g<sup>−1</sup>) after 100 cycles and retaining a specific capacity of 320 mAh/g even under high current rate (20C) after 200 cycles. This research underlines the importance of the use of electrocatalyst/electroadsorbent materials to enhance the redox kinetics of the conversion reactions between Se and Li<sub>2</sub>Se, thus paving the way for the development of high-performance Li-Se batteries.</p> </div></div> </div> </div> <div class="field field-name-field-open-access field-type-list-boolean field-label-hidden"> <div class="field-items"> <div class="field-item even"></div> </div> </div> <div class="field field-name-field-open-access-type field-type-list-text field-label-hidden"> <div class="field-items"> <div class="field-item even">Gold Open Access</div> </div> </div> <div class="field field-name-field-doi field-type-text field-label-above"> <h3><div class="field-label">DOI&nbsp;</div></h3> <div class="field-items"> <div class="field-item even"><div class="tex2jax"><p><a href="https://doi.org/10.1002/eem2.70038">https://doi.org/10.1002/eem2.70038</a></p> </div></div> </div> </div> <div class="field field-name-field-a1-file field-type-file field-label-above"> <h3><div class="field-label">Private attachment&nbsp;</div></h3> <div class="field-items"> <div class="field-item even"><span class="file"><img class="file-icon" alt="PDF icon" title="application/pdf" src="/modules/file/icons/application-pdf.png" /> <a href="https://molmod.ugent.be/system/files/MIL%E2%80%9091%20Al%20%20to%20Boost%20Solid%20Solid%20Conversion%20Reactions%20in%20Li%E2%80%90Se.pdf" type="application/pdf; length=3373565">MIL‐91 Al to Boost Solid Solid Conversion Reactions in Li‐Se.pdf</a></span></div> </div> </div> Thu, 22 May 2025 08:28:22 +0000 leen 6416 at https://molmod.ugent.be https://molmod.ugent.be/publications/mil-91al-boost-solid%E2%80%93solid-conversion-reactions-li-se-batteries#comments Cluster-based learning to describe disordered metal-organic frameworks at the mesoscale https://molmod.ugent.be/c1_c3_publications/cluster-based-learning-describe-disordered-metal-organic-frameworks-mesoscale <div class="field field-name-field-a1-authors field-type-taxonomy-term-reference field-label-hidden"> <span class="field-items"> <a href="/publication-authors/p-dobbelaere" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">P. Dobbelaere</a>, <a href="/publication-authors/s-vandenhaute" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">S. Vandenhaute</a>, <a href="/publication-authors/v-van-speybroeck" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">V. Van Speybroeck</a> </span> </div> <div class="field field-name-field-abstract-page field-type-text field-label-hidden"> <div class="field-items"> <div class="field-item even">384</div> </div> </div> <div class="field field-name-field-isbn-issn field-type-text field-label-hidden"> <div class="field-items"> <div class="field-item even">ISBN/ISSN:</div> </div> </div> <div class="field field-name-field-poster-or-talk field-type-list-text field-label-hidden"> <div class="field-items"> <div class="field-item even">Poster</div> </div> </div> <div class="field field-name-field-conference-name field-type-text field-label-above"> <h3><div class="field-label">Conference / event / venue&nbsp;</div></h3> <div class="field-items"> <div class="field-item even">EUROMOF2025</div> </div> </div> <div class="field field-name-field-conference-location field-type-text field-label-hidden"> <div class="field-items"> <div class="field-item even">Heraklion Greece</div> </div> </div> <div class="field field-name-field-conference-dates field-type-date field-label-hidden"> <div class="field-items"> <div class="field-item even"><span class="date-display-range"><span class="date-display-start" property="dc:date" datatype="xsd:dateTime" content="2025-09-19T00:00:00+02:00">Friday, 19 September, 2025</span> to <span class="date-display-end" property="dc:date" datatype="xsd:dateTime" content="2025-09-24T00:00:00+02:00">Wednesday, 24 September, 2025</span></span></div> </div> </div> <div class="field field-name-field-abstract-private field-type-file field-label-above"> <h3><div class="field-label">Abstract (private)&nbsp;</div></h3> <div class="field-items"> <div class="field-item even"><span class="file"><img class="file-icon" alt="PDF icon" title="application/pdf" src="/modules/file/icons/application-pdf.png" /> <a href="https://molmod.ugent.be/system/files/Abstract_EUROMOF2025_PieterDobbelaere.docx_.pdf" type="application/pdf; length=944130">Abstract_EUROMOF2025_PieterDobbelaere.docx_.pdf</a></span></div> </div> </div> Tue, 14 Oct 2025 09:20:15 +0000 pidobbel 6490 at https://molmod.ugent.be https://molmod.ugent.be/c1_c3_publications/cluster-based-learning-describe-disordered-metal-organic-frameworks-mesoscale#comments Pushing the limits of computational chemistry: the phase diagram of water https://molmod.ugent.be/c1_c3_publications/pushing-limits-computational-chemistry-phase-diagram-water <div class="field field-name-field-a1-authors field-type-taxonomy-term-reference field-label-hidden"> <span class="field-items"> <a href="/publication-authors/m-bocus" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">M. Bocus</a>, <a href="/publication-authors/t-braeckevelt" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">T. Braeckevelt</a>, <a href="/publication-authors/p-dobbelaere" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">P. Dobbelaere</a>, <a href="/publication-authors/maet" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">A. Maet</a>, <a href="/publication-authors/w-temmerman" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">W. Temmerman</a>, <a href="/publication-authors/s-vandenhaute" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">S. Vandenhaute</a>, <a href="/publication-authors/s-vanlommel" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">S. Vanlommel</a>, <a href="/publication-authors/j-vekeman" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">J. Vekeman</a>, <a href="/publication-authors/v-van-speybroeck" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">V. Van Speybroeck</a> </span> </div> <div class="field field-name-field-isbn-issn field-type-text field-label-hidden"> <div class="field-items"> <div class="field-item even">ISBN/ISSN:</div> </div> </div> <div class="field field-name-field-poster-or-talk field-type-list-text field-label-hidden"> <div class="field-items"> <div class="field-item even">Invited talk</div> </div> </div> <div class="field field-name-field-conference-name field-type-text field-label-above"> <h3><div class="field-label">Conference / event / venue&nbsp;</div></h3> <div class="field-items"> <div class="field-item even">EuroHPC User Days 2025</div> </div> </div> <div class="field field-name-field-conference-location field-type-text field-label-hidden"> <div class="field-items"> <div class="field-item even">Copenhagen, Denmark</div> </div> </div> <div class="field field-name-field-conference-dates field-type-date field-label-hidden"> <div class="field-items"> <div class="field-item even"><span class="date-display-range"><span class="date-display-start" property="dc:date" datatype="xsd:dateTime" content="2025-09-30T00:00:00+02:00">Tuesday, 30 September, 2025</span> to <span class="date-display-end" property="dc:date" datatype="xsd:dateTime" content="2025-10-01T00:00:00+02:00">Wednesday, 1 October, 2025</span></span></div> </div> </div> Wed, 01 Oct 2025 07:05:26 +0000 massimo 6480 at https://molmod.ugent.be https://molmod.ugent.be/c1_c3_publications/pushing-limits-computational-chemistry-phase-diagram-water#comments Cluster-based learning for disordered metal-organicframeworks at the mesoscale https://molmod.ugent.be/c1_c3_publications/cluster-based-learning-disordered-metal-organicframeworks-mesoscale <div class="field field-name-field-a1-authors field-type-taxonomy-term-reference field-label-hidden"> <span class="field-items"> <a href="/publication-authors/p-dobbelaere" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">P. Dobbelaere</a>, <a href="/publication-authors/s-vandenhaute" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">S. Vandenhaute</a>, <a href="/publication-authors/v-van-speybroeck" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">V. Van Speybroeck</a> </span> </div> <div class="field field-name-field-isbn-issn field-type-text field-label-hidden"> <div class="field-items"> <div class="field-item even">ISBN/ISSN:</div> </div> </div> <div class="field field-name-field-poster-or-talk field-type-list-text field-label-hidden"> <div class="field-items"> <div class="field-item even">Poster</div> </div> </div> <div class="field field-name-field-conference-name field-type-text field-label-above"> <h3><div class="field-label">Conference / event / venue&nbsp;</div></h3> <div class="field-items"> <div class="field-item even">MOFSIM2024</div> </div> </div> <div class="field field-name-field-conference-location field-type-text field-label-hidden"> <div class="field-items"> <div class="field-item even">Montpellier, France</div> </div> </div> <div class="field field-name-field-conference-dates field-type-date field-label-hidden"> <div class="field-items"> <div class="field-item even"><span class="date-display-range"><span class="date-display-start" property="dc:date" datatype="xsd:dateTime" content="2024-04-10T00:00:00+02:00">Wednesday, 10 April, 2024</span> to <span class="date-display-end" property="dc:date" datatype="xsd:dateTime" content="2024-04-12T00:00:00+02:00">Friday, 12 April, 2024</span></span></div> </div> </div> <div class="field field-name-field-conference-reference field-type-taxonomy-term-reference field-label-above"> <h3 class="field-label">Conference reference</h3> <span class="field-items"> <a href="/conferences/mofsim2024" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">MOFSIM2024</a> </span> </div> Thu, 18 Apr 2024 14:42:22 +0000 mieke 6251 at https://molmod.ugent.be https://molmod.ugent.be/c1_c3_publications/cluster-based-learning-disordered-metal-organicframeworks-mesoscale#comments It's all about time: Understanding the impact of coarse graining on accelerated diffusion in nanoporous materials https://molmod.ugent.be/thesis/its-all-about-time-understanding-impact-coarse-graining-accelerated-diffusion-nanoporous <div class="field field-name-field-a1-authors field-type-taxonomy-term-reference field-label-hidden"> <span class="field-items"> P. Dobbelaere </span> </div> <div class="field field-name-field-courses field-type-list-text field-label-hidden"> <div class="field-items"> <div class="field-item even">Master of Science in Engineering Physics</div> </div> </div> <div class="field field-name-field-master-year field-type-date field-label-hidden"> <div class="field-items"> <div class="field-item even"><span class="date-display-single" property="dc:date" datatype="xsd:dateTime" content="2021-01-01T00:00:00+01:00">2021</span></div> </div> </div> <div class="field field-name-field-promotoren field-type-taxonomy-term-reference field-label-inline clearfix"> <h3 class="field-label">Supervisors</h3> <span class="field-items"> <a href="/promotors/prof-dr-ir-v-van-speybroeck" typeof="skos:Concept" property="rdfs:label skos:prefLabel" datatype="">Prof. Dr. ir. V. Van Speybroeck</a> </span> </div> Thu, 24 Mar 2022 09:57:56 +0000 leen 5952 at https://molmod.ugent.be https://molmod.ugent.be/thesis/its-all-about-time-understanding-impact-coarse-graining-accelerated-diffusion-nanoporous#comments Dynamic nano-sponges: nuclear quantum effects meet neural network potentials https://molmod.ugent.be/subject/dynamic-nano-sponges-nuclear-quantum-effects-meet-neural-network-potentials Thu, 17 Mar 2022 10:43:49 +0000 leen 5895 at https://molmod.ugent.be https://molmod.ugent.be/subject/dynamic-nano-sponges-nuclear-quantum-effects-meet-neural-network-potentials#comments Pieter Dobbelaere https://molmod.ugent.be/members/pieter-dobbelaere Thu, 10 Sep 2020 08:50:43 +0000 samuel 5634 at https://molmod.ugent.be https://molmod.ugent.be/members/pieter-dobbelaere#comments